BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A01LP1|AL427549
(963 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1149 1842 0.0
>3x_Contig1149
Length = 5603
Score = 1842 bits (924), Expect = 0.0
Identities = 954/964 (98%), Gaps = 2/964 (0%)
Strand = Plus / Plus
Query: 1 atcctcgaatttgtccgtggtggttccagacaattcacttaatgaccatgactccgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1276 atcctcgaatttgtccgtggtggttccagacaattcacttaatgaccatgactccgaaat 1335
Query: 61 ttttactcagtacaaaaataacaaataataatgatacaaagccaataccttcccaacctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1336 ttttactcagtacaaaaataacaaataataatgatacaaagccaataccttcccaacctt 1395
Query: 121 cacttactatcgctctggaatagattcatgagttcgttatttggaaaaaacggtggcgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1396 cacttactatcgctctggaatagattcatgagttcgttatttggaaaaaacggtggcgga 1455
Query: 181 acacagctttcactacctaatcctgttctatattgcatgcctggtaatgttattcttgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1456 acacagctttcactacctaatcctgttctatattgcatgcctggtaatgttattcttgga 1515
Query: 241 ttactgcgaactatcagagcgtatgasagavataaagtgttggttttggtcgtaatgtac 300
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 1516 ttactgcgaactatcagagcgtatgaaagaaataaagtgttggttttggtcgtaatgtac 1575
Query: 301 attaaatcatcatcatactaagttagtttatattttactatatagattatcgtcgtttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1576 attaaatcatcatcatactaagttagtttatattttactatatagattatcgtcgtttct 1635
Query: 361 gtttgacgaagaaggaacagaacgacgacaagagaattcgtgttaatagtatcctaatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1636 gtttgacgaagaaggaacagaacgacgacaagagaattcgtgttaatagtatcctaatcc 1695
Query: 421 ttctataatccctaggagaagaagttcagttatatgtttcttggtggcctgtatatcgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1696 ttctataatccctaggagaagaagttcagttatatgtttcttggtggcctgtatatcgca 1755
Query: 481 ttcttaccaaataagttcctaattatacttctgccaatattacgtcctgcttgtctgcsa 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1756 ttcttaccaaataagttcctaattatacttctgccaatattacgtcctgcttgtctgcaa 1815
Query: 541 tattgtraccatggcttggcaacgatataaaataacgagagasagacaccctgcaaaaat 600
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1816 tattgtaaccatggcttggcaacgatataaaataacgagagaaagacaccctgcaaaaat 1875
Query: 601 ggacttatcaaaatatctctagcaacaacttttgcvacgatatatggtgtaatgggaggs 660
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1876 ggacttatcaaaatatctctagcaacaacttttgcaacgatatatggtgtaatgggagga 1935
Query: 661 tctacgacagatccatcagccaccgatagagttaatttattctgtttcaaagcttctttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1936 tctacgacagatccatcagccaccgatagagttaatttattctgtttcaaagcttctttc 1995
Query: 721 ctcaaggactgcttaaaggtctgttcaaatcgcaaatctggcaatgacgcctttactgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1996 ctcaaggactgcttaaaggtctgttcaaatcgcaaatctggcaatgacgcctttactgaa 2055
Query: 781 actttctcatccacacgggcaattcctttaggcatggtaaaaggctgattatctgtggat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2056 actttctcatccacacgggcaattcctttaggcatggtaaaaggctgattatctgtggat 2115
Query: 841 aactcaccttattttaaattcggtgatgtgtaattgtacttgatatttcgcctattgcgt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 aactcaccttattttaaattcggtgatgtgtaattgtacttgatatttcgcctattgcgt 2175
Query: 901 gggatcagctttctaatatgttcaaaaaccgatttgaaggt-cyacaaagaag-aataat 958
||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||
Sbjct: 2176 gggatcagctttctaatatgttcaaaaaccgatttgaaggtcctacaaagaagaaataat 2235
Query: 959 gcta 962
||||
Sbjct: 2236 gcta 2239
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6916
Number of Sequences: 1807
Number of extensions: 6916
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 963
length of database: 10,358,551
effective HSP length: 16
effective length of query: 947
effective length of database: 10,329,639
effective search space: 9782168133
effective search space used: 9782168133
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)